whitematteranalysis.anatomy package#
Subpackages#
Submodules#
whitematteranalysis.anatomy.org_atlas_utils module#
- class whitematteranalysis.anatomy.org_atlas_utils.AtlasAvailability(value)#
Bases:
Enum
An enumeration.
- DEFAULT = 'default'#
- SEPARATED = 'separated'#
- class whitematteranalysis.anatomy.org_atlas_utils.Hemisphere(value)#
Bases:
Enum
An enumeration.
- LEFT = 'left'#
- RIGHT = 'right'#
- class whitematteranalysis.anatomy.org_atlas_utils.ORGAtlasBundleFileHeading(value)#
Bases:
Enum
An enumeration.
- ID = 'id'#
- LONG_NAME = 'long_name'#
- SHORT_NAME = 'short_name'#
- class whitematteranalysis.anatomy.org_atlas_utils.ORGAtlasBundleRange(value)#
Bases:
Enum
An enumeration.
- ASO = (101, 199)#
- CER = (201, 299)#
- COM = (301, 399)#
- PRO = (401, 499)#
- STR = (501, 599)#
- SUP = (601, 699)#
- static get_range_high(name)#
- static get_range_low(name)#
- class whitematteranalysis.anatomy.org_atlas_utils.ORGAtlasBundleType(value)#
Bases:
Enum
An enumeration.
- ASS = 'Association'#
- CER = 'Cerebellar'#
- COM = 'Commissural'#
- PRO = 'Projection'#
- STR = 'Striatal'#
- SUP = 'Superficial'#
- whitematteranalysis.anatomy.org_atlas_utils.add_org_atlas_prefix(bundles)#
- whitematteranalysis.anatomy.org_atlas_utils.get_association_bundles(df)#
- whitematteranalysis.anatomy.org_atlas_utils.get_bundle_feature(df, bundle_id, column)#
- whitematteranalysis.anatomy.org_atlas_utils.get_bundle_long_name(df, bundle_id)#
- whitematteranalysis.anatomy.org_atlas_utils.get_bundle_short_name(df, bundle_id)#
- whitematteranalysis.anatomy.org_atlas_utils.get_bundle_type(df, bundle_type)#
- whitematteranalysis.anatomy.org_atlas_utils.get_bundles(df, bundle_id)#
- whitematteranalysis.anatomy.org_atlas_utils.get_cerebellar_bundles(df)#
- whitematteranalysis.anatomy.org_atlas_utils.get_commissural_augmented_bundles(df)#
- whitematteranalysis.anatomy.org_atlas_utils.get_commissural_bundles(df)#
- whitematteranalysis.anatomy.org_atlas_utils.get_hemispheric_bundles(df)#
- whitematteranalysis.anatomy.org_atlas_utils.get_hemispheric_mono_bundles(df)#
- whitematteranalysis.anatomy.org_atlas_utils.get_projection_bundles(df)#
- whitematteranalysis.anatomy.org_atlas_utils.get_striatal_bundles(df)#
- whitematteranalysis.anatomy.org_atlas_utils.get_superficial_bundles(df)#
- whitematteranalysis.anatomy.org_atlas_utils.query_bundle_names(path, atlas_availability)#
- whitematteranalysis.anatomy.org_atlas_utils.query_bundle_names_from_anatomical_tracts(path)#
- whitematteranalysis.anatomy.org_atlas_utils.query_bundle_names_from_scene_files(path)#